Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG5O95196 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSPG5O95196 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.65■■□□□ 1.06
CSPG5O95196 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.65■■□□□ 1.06
CSPG5O95196 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSPG5O95196 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CSPG5O95196 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSPG5O95196 HTR7P1-201ENST00000538670 1336 ntBASIC21.64■■□□□ 1.05
CSPG5O95196 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG5O95196 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
CSPG5O95196 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.64■■□□□ 1.05
CSPG5O95196 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG5O95196 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CSPG5O95196 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.64■■□□□ 1.05
CSPG5O95196 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.64■■□□□ 1.05
CSPG5O95196 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.64■■□□□ 1.05
CSPG5O95196 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.64■■□□□ 1.05
CSPG5O95196 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.64■■□□□ 1.05
CSPG5O95196 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.64■■□□□ 1.05
CSPG5O95196 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG5O95196 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG5O95196 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG5O95196 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG5O95196 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG5O95196 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG5O95196 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSPG5O95196 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CSPG5O95196 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSPG5O95196 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSPG5O95196 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSPG5O95196 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSPG5O95196 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSPG5O95196 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSPG5O95196 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.63■■□□□ 1.05
CSPG5O95196 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSPG5O95196 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.63■■□□□ 1.05
CSPG5O95196 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CSPG5O95196 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.63■■□□□ 1.05
CSPG5O95196 AC012306.2-201ENST00000609350 630 ntBASIC21.63■■□□□ 1.05
CSPG5O95196 MIR6786-201ENST00000616843 113 ntBASIC21.63■■□□□ 1.05
CSPG5O95196 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSPG5O95196 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSPG5O95196 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSPG5O95196 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSPG5O95196 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSPG5O95196 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CSPG5O95196 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSPG5O95196 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CSPG5O95196 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSPG5O95196 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSPG5O95196 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.62■■□□□ 1.05
CSPG5O95196 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.62■■□□□ 1.05
CSPG5O95196 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.62■■□□□ 1.05
CSPG5O95196 CD177P1-201ENST00000606252 935 ntBASIC21.62■■□□□ 1.05
CSPG5O95196 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSPG5O95196 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.62■■□□□ 1.05
CSPG5O95196 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSPG5O95196 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSPG5O95196 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.62■■□□□ 1.05
CSPG5O95196 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSPG5O95196 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSPG5O95196 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSPG5O95196 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CSPG5O95196 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSPG5O95196 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.61■■□□□ 1.05
CSPG5O95196 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSPG5O95196 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSPG5O95196 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.61■■□□□ 1.05
CSPG5O95196 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSPG5O95196 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CSPG5O95196 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.61■■□□□ 1.05
CSPG5O95196 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSPG5O95196 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.61■■□□□ 1.05
CSPG5O95196 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.61■■□□□ 1.05
CSPG5O95196 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSPG5O95196 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSPG5O95196 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CSPG5O95196 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSPG5O95196 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSPG5O95196 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSPG5O95196 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSPG5O95196 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSPG5O95196 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSPG5O95196 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSPG5O95196 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CSPG5O95196 MMP23A-201ENST00000234610 1017 ntBASIC21.6■■□□□ 1.05
CSPG5O95196 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CSPG5O95196 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.6■■□□□ 1.05
CSPG5O95196 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CSPG5O95196 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSPG5O95196 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.6■■□□□ 1.05
CSPG5O95196 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSPG5O95196 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSPG5O95196 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSPG5O95196 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.6■■□□□ 1.05
CSPG5O95196 GUSBP5-202ENST00000510805 1989 ntBASIC21.59■■□□□ 1.05
CSPG5O95196 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.59■■□□□ 1.05
CSPG5O95196 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.59■■□□□ 1.05
CSPG5O95196 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSPG5O95196 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms