Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AL356652.1-201ENST00000615962 565 ntBASIC20.34■□□□□ 0.85
USP1O94782 AC013268.1-206ENST00000638368 961 ntBASIC20.34■□□□□ 0.85
USP1O94782 AC112229.1-201ENST00000639295 961 ntBASIC20.34■□□□□ 0.85
USP1O94782 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.34■□□□□ 0.85
USP1O94782 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.34■□□□□ 0.85
USP1O94782 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP1O94782 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP1O94782 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP1O94782 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP1O94782 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP1O94782 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
USP1O94782 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP1O94782 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP1O94782 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.33■□□□□ 0.85
USP1O94782 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.33■□□□□ 0.85
USP1O94782 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.33■□□□□ 0.85
USP1O94782 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP1O94782 CYP21A1P-202ENST00000354927 1481 ntBASIC20.33■□□□□ 0.85
USP1O94782 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
USP1O94782 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP1O94782 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.33■□□□□ 0.85
USP1O94782 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.33■□□□□ 0.85
USP1O94782 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.33■□□□□ 0.85
USP1O94782 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
USP1O94782 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP1O94782 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP1O94782 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
USP1O94782 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.33■□□□□ 0.84
USP1O94782 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP1O94782 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP1O94782 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.32■□□□□ 0.84
USP1O94782 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.32■□□□□ 0.84
USP1O94782 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP1O94782 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP1O94782 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.32■□□□□ 0.84
USP1O94782 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.32■□□□□ 0.84
USP1O94782 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.32■□□□□ 0.84
USP1O94782 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP1O94782 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP1O94782 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP1O94782 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP1O94782 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP1O94782 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.32■□□□□ 0.84
USP1O94782 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP1O94782 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP1O94782 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.31■□□□□ 0.84
USP1O94782 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
USP1O94782 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.31■□□□□ 0.84
USP1O94782 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
USP1O94782 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.31■□□□□ 0.84
USP1O94782 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
USP1O94782 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.31■□□□□ 0.84
USP1O94782 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.31■□□□□ 0.84
USP1O94782 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
USP1O94782 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.31■□□□□ 0.84
USP1O94782 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.31■□□□□ 0.84
USP1O94782 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP1O94782 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.31■□□□□ 0.84
USP1O94782 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
USP1O94782 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP1O94782 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP1O94782 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP1O94782 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
USP1O94782 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP1O94782 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP1O94782 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
USP1O94782 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.3■□□□□ 0.84
USP1O94782 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
USP1O94782 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.3■□□□□ 0.84
USP1O94782 AC022517.1-201ENST00000592429 346 ntBASIC20.3■□□□□ 0.84
USP1O94782 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP1O94782 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.3■□□□□ 0.84
USP1O94782 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP1O94782 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.3■□□□□ 0.84
USP1O94782 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP1O94782 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP1O94782 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
USP1O94782 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.3■□□□□ 0.84
USP1O94782 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
USP1O94782 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP1O94782 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP1O94782 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.29■□□□□ 0.84
USP1O94782 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms