Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.08■□□□□ 0.64
SCN2BO60939 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.08■□□□□ 0.64
SCN2BO60939 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.08■□□□□ 0.64
SCN2BO60939 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.08■□□□□ 0.64
SCN2BO60939 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.08■□□□□ 0.64
SCN2BO60939 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SCN2BO60939 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SCN2BO60939 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN2BO60939 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.08■□□□□ 0.64
SCN2BO60939 AC087633.2-202ENST00000565166 1439 ntBASIC19.08■□□□□ 0.64
SCN2BO60939 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN2BO60939 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SCN2BO60939 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.08■□□□□ 0.64
SCN2BO60939 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN2BO60939 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN2BO60939 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN2BO60939 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN2BO60939 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SCN2BO60939 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN2BO60939 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
SCN2BO60939 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SCN2BO60939 AC034268.1-201ENST00000441047 882 ntBASIC19.07■□□□□ 0.64
SCN2BO60939 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN2BO60939 AL591742.1-201ENST00000604433 565 ntBASIC19.07■□□□□ 0.64
SCN2BO60939 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SCN2BO60939 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
SCN2BO60939 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN2BO60939 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN2BO60939 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN2BO60939 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SCN2BO60939 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN2BO60939 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.07■□□□□ 0.64
SCN2BO60939 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.07■□□□□ 0.64
SCN2BO60939 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN2BO60939 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCN2BO60939 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN2BO60939 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.06■□□□□ 0.64
SCN2BO60939 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN2BO60939 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN2BO60939 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN2BO60939 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN2BO60939 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.06■□□□□ 0.64
SCN2BO60939 CYP21A1P-202ENST00000354927 1481 ntBASIC19.06■□□□□ 0.64
SCN2BO60939 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN2BO60939 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
SCN2BO60939 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.06■□□□□ 0.64
SCN2BO60939 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.06■□□□□ 0.64
SCN2BO60939 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN2BO60939 AL356652.1-201ENST00000615962 565 ntBASIC19.06■□□□□ 0.64
SCN2BO60939 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN2BO60939 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.06■□□□□ 0.64
SCN2BO60939 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN2BO60939 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCN2BO60939 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN2BO60939 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCN2BO60939 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.05■□□□□ 0.64
SCN2BO60939 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
SCN2BO60939 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.05■□□□□ 0.64
SCN2BO60939 AC007322.4-201ENST00000509611 723 ntBASIC19.05■□□□□ 0.64
SCN2BO60939 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.05■□□□□ 0.64
SCN2BO60939 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.05■□□□□ 0.64
SCN2BO60939 AL162412.1-201ENST00000567129 965 ntBASIC19.05■□□□□ 0.64
SCN2BO60939 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.05■□□□□ 0.64
SCN2BO60939 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.05■□□□□ 0.64
SCN2BO60939 MIR6821-201ENST00000617625 74 ntBASIC19.05■□□□□ 0.64
SCN2BO60939 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
SCN2BO60939 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.05■□□□□ 0.64
SCN2BO60939 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN2BO60939 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SCN2BO60939 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN2BO60939 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.04■□□□□ 0.64
SCN2BO60939 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN2BO60939 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN2BO60939 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.04■□□□□ 0.64
SCN2BO60939 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
SCN2BO60939 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCN2BO60939 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCN2BO60939 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.04■□□□□ 0.64
SCN2BO60939 AC016405.3-201ENST00000607710 860 ntBASIC19.04■□□□□ 0.64
SCN2BO60939 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.04■□□□□ 0.64
SCN2BO60939 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.04■□□□□ 0.64
SCN2BO60939 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN2BO60939 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.04■□□□□ 0.64
SCN2BO60939 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN2BO60939 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms