Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CYTIPO60759 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CYTIPO60759 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CYTIPO60759 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYTIPO60759 DPP3P2-201ENST00000416030 1696 ntBASIC17.94■□□□□ 0.46
CYTIPO60759 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYTIPO60759 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYTIPO60759 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYTIPO60759 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CYTIPO60759 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.94■□□□□ 0.46
CYTIPO60759 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CYTIPO60759 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.94■□□□□ 0.46
CYTIPO60759 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CYTIPO60759 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CYTIPO60759 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CYTIPO60759 AC020907.5-201ENST00000624372 1936 ntBASIC17.94■□□□□ 0.46
CYTIPO60759 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CYTIPO60759 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CYTIPO60759 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CYTIPO60759 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
CYTIPO60759 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.93■□□□□ 0.46
CYTIPO60759 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.93■□□□□ 0.46
CYTIPO60759 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CYTIPO60759 AC005829.2-201ENST00000571422 1056 ntBASIC17.93■□□□□ 0.46
CYTIPO60759 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 PTBP1P-201ENST00000554374 1601 ntBASIC17.93■□□□□ 0.46
CYTIPO60759 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 FEM1AP1-201ENST00000431297 1995 ntBASIC17.93■□□□□ 0.46
CYTIPO60759 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.93■□□□□ 0.46
CYTIPO60759 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.93■□□□□ 0.46
CYTIPO60759 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CYTIPO60759 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CYTIPO60759 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.92■□□□□ 0.46
CYTIPO60759 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 AP005212.1-201ENST00000581547 1997 ntBASIC17.92■□□□□ 0.46
CYTIPO60759 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.92■□□□□ 0.46
CYTIPO60759 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CYTIPO60759 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CYTIPO60759 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.92■□□□□ 0.46
CYTIPO60759 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.92■□□□□ 0.46
CYTIPO60759 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.92■□□□□ 0.46
CYTIPO60759 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 UNC93B5-201ENST00000530315 699 ntBASIC17.92■□□□□ 0.46
CYTIPO60759 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.92■□□□□ 0.46
CYTIPO60759 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.92■□□□□ 0.46
CYTIPO60759 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.92■□□□□ 0.46
CYTIPO60759 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 AC073314.1-201ENST00000568729 2216 ntBASIC17.92■□□□□ 0.46
CYTIPO60759 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CYTIPO60759 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CYTIPO60759 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.91■□□□□ 0.46
CYTIPO60759 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.91■□□□□ 0.46
CYTIPO60759 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.91■□□□□ 0.46
CYTIPO60759 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYTIPO60759 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYTIPO60759 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.91■□□□□ 0.46
CYTIPO60759 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYTIPO60759 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CYTIPO60759 AL390719.1-204ENST00000412397 1219 ntBASIC17.91■□□□□ 0.46
CYTIPO60759 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.91■□□□□ 0.46
CYTIPO60759 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CYTIPO60759 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYTIPO60759 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.91■□□□□ 0.46
CYTIPO60759 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CYTIPO60759 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYTIPO60759 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CYTIPO60759 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYTIPO60759 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CYTIPO60759 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYTIPO60759 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYTIPO60759 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CYTIPO60759 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CYTIPO60759 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.9■□□□□ 0.46
CYTIPO60759 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms