Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.57■□□□□ 0.72
HDAC3O15379 CCDC92B-201ENST00000575506 885 ntBASIC19.57■□□□□ 0.72
HDAC3O15379 AP001160.3-201ENST00000601484 763 ntBASIC19.57■□□□□ 0.72
HDAC3O15379 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.57■□□□□ 0.72
HDAC3O15379 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.57■□□□□ 0.72
HDAC3O15379 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HDAC3O15379 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HDAC3O15379 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC3O15379 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.56■□□□□ 0.72
HDAC3O15379 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.56■□□□□ 0.72
HDAC3O15379 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC3O15379 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC3O15379 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC3O15379 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC3O15379 AC104187.1-201ENST00000607510 612 ntBASIC19.56■□□□□ 0.72
HDAC3O15379 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.56■□□□□ 0.72
HDAC3O15379 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC3O15379 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC3O15379 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC3O15379 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC3O15379 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
HDAC3O15379 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC3O15379 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC3O15379 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HDAC3O15379 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HDAC3O15379 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC3O15379 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC3O15379 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
HDAC3O15379 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.55■□□□□ 0.72
HDAC3O15379 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC3O15379 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HDAC3O15379 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC3O15379 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
HDAC3O15379 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC3O15379 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC3O15379 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC3O15379 SUDS3P1-201ENST00000505831 966 ntBASIC19.55■□□□□ 0.72
HDAC3O15379 KRT18P20-201ENST00000548986 1279 ntBASIC19.55■□□□□ 0.72
HDAC3O15379 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.55■□□□□ 0.72
HDAC3O15379 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HDAC3O15379 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
HDAC3O15379 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC3O15379 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC3O15379 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
HDAC3O15379 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.55■□□□□ 0.72
HDAC3O15379 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
HDAC3O15379 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HDAC3O15379 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC3O15379 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.54■□□□□ 0.72
HDAC3O15379 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC3O15379 RBM17P2-201ENST00000616397 1405 ntBASIC19.54■□□□□ 0.72
HDAC3O15379 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC3O15379 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC3O15379 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.54■□□□□ 0.72
HDAC3O15379 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.54■□□□□ 0.72
HDAC3O15379 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.54■□□□□ 0.72
HDAC3O15379 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC3O15379 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC3O15379 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC3O15379 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC3O15379 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC3O15379 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC3O15379 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.54■□□□□ 0.72
HDAC3O15379 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC3O15379 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC3O15379 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HDAC3O15379 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
HDAC3O15379 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.53■□□□□ 0.72
HDAC3O15379 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC3O15379 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.53■□□□□ 0.72
HDAC3O15379 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC3O15379 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.53■□□□□ 0.72
HDAC3O15379 AC105265.2-201ENST00000467189 838 ntBASIC19.53■□□□□ 0.72
HDAC3O15379 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.53■□□□□ 0.72
HDAC3O15379 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.53■□□□□ 0.72
HDAC3O15379 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.53■□□□□ 0.72
HDAC3O15379 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC3O15379 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.53■□□□□ 0.72
HDAC3O15379 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HDAC3O15379 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HDAC3O15379 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.53■□□□□ 0.72
HDAC3O15379 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.53■□□□□ 0.72
HDAC3O15379 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC3O15379 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC3O15379 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC3O15379 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC3O15379 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC3O15379 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC3O15379 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
HDAC3O15379 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.52■□□□□ 0.72
HDAC3O15379 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HDAC3O15379 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.52■□□□□ 0.72
HDAC3O15379 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms