Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDX4O14627 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.53■□□□□ 0.72
CDX4O14627 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDX4O14627 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CDX4O14627 TSPY14P-201ENST00000303979 915 ntBASIC19.53■□□□□ 0.72
CDX4O14627 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDX4O14627 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDX4O14627 AK4P3-201ENST00000418260 669 ntBASIC19.53■□□□□ 0.72
CDX4O14627 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.53■□□□□ 0.72
CDX4O14627 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.53■□□□□ 0.72
CDX4O14627 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.53■□□□□ 0.72
CDX4O14627 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CDX4O14627 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.53■□□□□ 0.72
CDX4O14627 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDX4O14627 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDX4O14627 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDX4O14627 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDX4O14627 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.53■□□□□ 0.72
CDX4O14627 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDX4O14627 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDX4O14627 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDX4O14627 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDX4O14627 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDX4O14627 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDX4O14627 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.52■□□□□ 0.72
CDX4O14627 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDX4O14627 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.52■□□□□ 0.72
CDX4O14627 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDX4O14627 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CDX4O14627 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
CDX4O14627 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDX4O14627 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.52■□□□□ 0.72
CDX4O14627 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDX4O14627 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
CDX4O14627 AC063952.2-201ENST00000498792 1227 ntBASIC19.52■□□□□ 0.72
CDX4O14627 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDX4O14627 AC022616.7-201ENST00000525383 220 ntBASIC19.52■□□□□ 0.72
CDX4O14627 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.52■□□□□ 0.72
CDX4O14627 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.52■□□□□ 0.72
CDX4O14627 AL031985.4-201ENST00000642138 673 ntBASIC19.52■□□□□ 0.72
CDX4O14627 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.52■□□□□ 0.72
CDX4O14627 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.52■□□□□ 0.71
CDX4O14627 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDX4O14627 AC011484.1-201ENST00000377652 1995 ntBASIC19.52■□□□□ 0.71
CDX4O14627 KRT8P36-201ENST00000489121 1440 ntBASIC19.51■□□□□ 0.71
CDX4O14627 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDX4O14627 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDX4O14627 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.51■□□□□ 0.71
CDX4O14627 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
CDX4O14627 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDX4O14627 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDX4O14627 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDX4O14627 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CDX4O14627 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDX4O14627 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CDX4O14627 BX664615.1-201ENST00000443558 458 ntBASIC19.51■□□□□ 0.71
CDX4O14627 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDX4O14627 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
CDX4O14627 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.51■□□□□ 0.71
CDX4O14627 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.51■□□□□ 0.71
CDX4O14627 AP005242.2-201ENST00000580065 1175 ntBASIC19.51■□□□□ 0.71
CDX4O14627 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
CDX4O14627 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.51■□□□□ 0.71
CDX4O14627 AL121894.2-201ENST00000602977 491 ntBASIC19.51■□□□□ 0.71
CDX4O14627 FSCN1P1-201ENST00000568912 1481 ntBASIC19.51■□□□□ 0.71
CDX4O14627 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.51■□□□□ 0.71
CDX4O14627 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.51■□□□□ 0.71
CDX4O14627 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.51■□□□□ 0.71
CDX4O14627 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.5■□□□□ 0.71
CDX4O14627 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDX4O14627 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDX4O14627 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.5■□□□□ 0.71
CDX4O14627 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.5■□□□□ 0.71
CDX4O14627 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.5■□□□□ 0.71
CDX4O14627 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.5■□□□□ 0.71
CDX4O14627 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDX4O14627 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDX4O14627 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.5■□□□□ 0.71
CDX4O14627 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CDX4O14627 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.49■□□□□ 0.71
CDX4O14627 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CDX4O14627 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDX4O14627 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CDX4O14627 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.49■□□□□ 0.71
CDX4O14627 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDX4O14627 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDX4O14627 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDX4O14627 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDX4O14627 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDX4O14627 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDX4O14627 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDX4O14627 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDX4O14627 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.49■□□□□ 0.71
CDX4O14627 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.49■□□□□ 0.71
CDX4O14627 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDX4O14627 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDX4O14627 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CDX4O14627 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDX4O14627 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDX4O14627 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms