Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TMEM88BA6NKF7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
TMEM88BA6NKF7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
TMEM88BA6NKF7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
TMEM88BA6NKF7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
TMEM88BA6NKF7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC23.64■■□□□ 1.37
TMEM88BA6NKF7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC23.64■■□□□ 1.37
TMEM88BA6NKF7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC23.64■■□□□ 1.37
TMEM88BA6NKF7 AC116407.4-201ENST00000623319 1061 ntBASIC23.64■■□□□ 1.37
TMEM88BA6NKF7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.64■■□□□ 1.37
TMEM88BA6NKF7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TMEM88BA6NKF7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 AC006538.3-201ENST00000612495 578 ntBASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 AC012313.10-201ENST00000623509 926 ntBASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.63■■□□□ 1.37
TMEM88BA6NKF7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 AC005332.1-201ENST00000577698 1310 ntBASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 CD70-202ENST00000423145 881 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 AC011506.1-201ENST00000474329 610 ntBASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 AC011558.1-201ENST00000623459 338 ntBASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TMEM88BA6NKF7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM88BA6NKF7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM88BA6NKF7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TMEM88BA6NKF7 PVRIG2P-201ENST00000435460 978 ntBASIC23.61■■□□□ 1.37
TMEM88BA6NKF7 AP000347.1-202ENST00000435868 847 ntBASIC23.61■■□□□ 1.37
TMEM88BA6NKF7 AL671277.2-201ENST00000458060 996 ntBASIC23.61■■□□□ 1.37
TMEM88BA6NKF7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.61■■□□□ 1.37
TMEM88BA6NKF7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC23.61■■□□□ 1.37
TMEM88BA6NKF7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.61■■□□□ 1.37
TMEM88BA6NKF7 AL445675.2-201ENST00000620291 557 ntBASIC23.61■■□□□ 1.37
TMEM88BA6NKF7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 HOMER2P1-201ENST00000455653 964 ntBASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 SLC25A1P4-201ENST00000567977 778 ntBASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 AC116562.4-202ENST00000641738 218 ntBASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
TMEM88BA6NKF7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 FDX1P1-201ENST00000449115 551 ntBASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.59■■□□□ 1.37
TMEM88BA6NKF7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.58■■□□□ 1.37
TMEM88BA6NKF7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TMEM88BA6NKF7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
TMEM88BA6NKF7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TMEM88BA6NKF7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
TMEM88BA6NKF7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.58■■□□□ 1.37
TMEM88BA6NKF7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.58■■□□□ 1.37
TMEM88BA6NKF7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TMEM88BA6NKF7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
TMEM88BA6NKF7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
TMEM88BA6NKF7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms