Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 OR10C1-204ENST00000622521 1039 ntBASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRBV6-4A0A1B0GX49 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
TRBV6-4A0A1B0GX49 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV6-4A0A1B0GX49 TCF3P1-201ENST00000423021 1937 ntBASIC14.21□□□□□ -0.14
TRBV6-4A0A1B0GX49 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV6-4A0A1B0GX49 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRBV6-4A0A1B0GX49 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRBV6-4A0A1B0GX49 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 KRT18P68-201ENST00000392293 1000 ntBASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 AC105020.6-201ENST00000621523 1217 ntBASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRBV6-4A0A1B0GX49 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 CYP2T1P-201ENST00000432607 1285 ntBASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 AC022517.1-201ENST00000592429 346 ntBASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.19□□□□□ -0.14
TRBV6-4A0A1B0GX49 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 BX119927.1-201ENST00000636596 1552 ntBASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 AL512625.2-201ENST00000417533 625 ntBASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 APTR-203ENST00000430801 583 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 CYP2T3P-201ENST00000601990 817 ntBASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 AL391422.3-201ENST00000603791 2761 ntBASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-4A0A1B0GX49 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms