Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AC023632.3-201ENST00000521633 145 ntBASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AC005829.2-201ENST00000571422 1056 ntBASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
PNMA6EA0A0J9YXQ4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 UNC93B5-201ENST00000530315 699 ntBASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AC099778.1-201ENST00000568593 1911 ntBASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AC006557.6-201ENST00000623071 864 ntBASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AC112907.3-201ENST00000577781 2400 ntBASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 KRT8P17-201ENST00000453110 1448 ntBASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AC008403.3-201ENST00000598924 454 ntBASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
PNMA6EA0A0J9YXQ4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AL031963.3-201ENST00000606441 850 ntBASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC24.97■■□□□ 1.59
PNMA6EA0A0J9YXQ4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PNMA6EA0A0J9YXQ4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
PNMA6EA0A0J9YXQ4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.95■■□□□ 1.59
PNMA6EA0A0J9YXQ4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms