Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV27A0A087WT01 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 AL591742.1-201ENST00000604433 565 ntBASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 AL356652.1-201ENST00000615962 565 ntBASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 AL691432.2-201ENST00000607222 2038 ntBASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 AC087633.2-202ENST00000565166 1439 ntBASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV27A0A087WT01 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 MIR6821-201ENST00000617625 74 ntBASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV27A0A087WT01 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 AC125437.2-201ENST00000625180 2167 ntBASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 PGM5P4-201ENST00000421970 445 ntBASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 AC137761.2-201ENST00000561729 223 ntBASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 AC145350.3-201ENST00000569033 163 ntBASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 AC016405.3-201ENST00000607710 860 ntBASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV27A0A087WT01 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.21■□□□□ 0.5
TRAV27A0A087WT01 CYP21A1P-202ENST00000354927 1481 ntBASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV27A0A087WT01 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms