Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 ZNRF2P3-201ENST00000424200 374 ntBASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 KRT18P11-201ENST00000435214 1283 ntBASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 MYCNOS-205ENST00000641950 531 ntBASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV30A0A087WSZ9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV30A0A087WSZ9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV30A0A087WSZ9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV30A0A087WSZ9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV30A0A087WSZ9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV30A0A087WSZ9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV30A0A087WSZ9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV30A0A087WSZ9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV30A0A087WSZ9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 AC034268.1-201ENST00000441047 882 ntBASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 UBE2DNL-204ENST00000602536 740 ntBASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 AL591742.1-201ENST00000604433 565 ntBASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV30A0A087WSZ9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 TERF1P5-201ENST00000477545 1207 ntBASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 AL162412.1-201ENST00000567129 965 ntBASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV30A0A087WSZ9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms