Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC074198.1-201ENST00000506546 1397 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 SNORA68-201ENST00000384437 133 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 CRIP1P3-201ENST00000416794 220 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 OR7E36P-201ENST00000419933 954 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 LINC01715-201ENST00000420776 624 ntTSL 2 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 SNX18P3-201ENST00000424993 835 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 GAPDHP51-201ENST00000426454 1000 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 RNF11P2-201ENST00000427702 440 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 AC005040.1-201ENST00000437783 482 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 LINC00578-201ENST00000439009 542 ntTSL 4 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 CDC42P2-201ENST00000448566 569 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 MRPS21P1-201ENST00000453850 223 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 AC090680.1-201ENST00000464696 860 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 SNX18P27-201ENST00000523611 779 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 OR7E87P-201ENST00000532397 929 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 AC092133.1-201ENST00000565828 719 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 DLGAP1-AS3-201ENST00000577649 1258 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 MIR3689C-201ENST00000581239 72 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 DSG1-AS1-204ENST00000581856 669 ntTSL 3 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 AC135050.6-202ENST00000613584 392 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 RN7SL820P-201ENST00000616437 299 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 C18orf12-201ENST00000623329 537 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 SNORA43.5-201ENST00000631270 138 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 AC016582.3-206ENST00000636547 207 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 GTF2IP1-202ENST00000614592 2047 ntBASIC8.11□□□□□ -1.11
LMO3Q8TAP4 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
LMO3Q8TAP4 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 R3HCC1L-206ENST00000613938 1397 ntTSL 5 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 CD86-209ENST00000493101 1572 ntTSL 2 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 RAI14-220ENST00000512629 2941 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 LST1-211ENST00000376110 433 ntTSL 3 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 MIR181C-201ENST00000384881 110 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 SNORA35-201ENST00000386104 128 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 AC092952.1-201ENST00000397646 1209 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 GNAI2P2-201ENST00000417003 916 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 EEF1A1P34-201ENST00000419888 1267 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 Z83313.1-201ENST00000433780 718 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 AC015820.1-201ENST00000473882 321 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 NPY6R-201ENST00000503807 1112 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 OR7E1P-201ENST00000533891 958 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 AL356800.1-201ENST00000553339 735 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 AC013283.1-201ENST00000557282 492 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 DNM1P31-201ENST00000564149 696 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 RN7SL786P-201ENST00000579130 298 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 AL161891.1-201ENST00000621575 4636 ntBASIC8.1□□□□□ -1.11
LMO3Q8TAP4 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 RBMXL1-202ENST00000399794 5084 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LMO3Q8TAP4 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
LMO3Q8TAP4 AL445250.1-203ENST00000641829 1535 ntBASIC8.09□□□□□ -1.11
LMO3Q8TAP4 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms