Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 RPS2P25-201ENST00000467247 580 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 AC106872.6-201ENST00000514228 1346 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 OR7E1P-201ENST00000533891 958 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 AP003174.3-201ENST00000537926 516 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 AC104964.2-201ENST00000562242 4641 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 DARS-AS1-213ENST00000596410 741 ntTSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 AL021918.1-201ENST00000603933 236 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 MARK3P1-201ENST00000604796 643 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 AC104237.3-201ENST00000611809 427 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 AC124319.3-201ENST00000616832 526 ntBASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDK5RAP1Q96SZ6 NF1P2-201ENST00000556855 2505 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 CDYLP1-201ENST00000419017 1458 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 PSMD10-203ENST00000340200 713 ntTSL 3 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 CLCN3P1-201ENST00000423965 1017 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 PRPS1P2-201ENST00000430496 937 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 TRIM60P13-201ENST00000432350 1283 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 AL607028.1-201ENST00000433455 794 ntTSL 3 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 AC013399.1-201ENST00000450311 418 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 KIF3AP1-201ENST00000454055 611 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 ATP1B3-202ENST00000462082 837 ntTSL 3 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 IGLV10-67-201ENST00000519446 325 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 VDAC2P2-201ENST00000544463 901 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 FDPSP3-201ENST00000556903 1013 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 MIR3137-201ENST00000577367 75 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 RN7SL473P-201ENST00000580341 299 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 GLUD1P2-201ENST00000583339 201 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 GLUD1P8-201ENST00000585063 203 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 AC022239.4-201ENST00000602626 504 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 AC004908.3-201ENST00000610248 625 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 AC069499.2-201ENST00000610665 382 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 AC020978.9-201ENST00000624380 1141 ntBASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CDK5RAP1Q96SZ6 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
CDK5RAP1Q96SZ6 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDK5RAP1Q96SZ6 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDK5RAP1Q96SZ6 AL080317.3-201ENST00000607434 4315 ntBASIC8.15□□□□□ -1.11
CDK5RAP1Q96SZ6 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDK5RAP1Q96SZ6 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDK5RAP1Q96SZ6 AP000766.1-201ENST00000561746 4140 ntBASIC8.15□□□□□ -1.11
CDK5RAP1Q96SZ6 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
CDK5RAP1Q96SZ6 XRCC6P5-201ENST00000435236 1795 ntBASIC8.15□□□□□ -1.11
CDK5RAP1Q96SZ6 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CDK5RAP1Q96SZ6 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CDK5RAP1Q96SZ6 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AC005831.1-201ENST00000624384 1697 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms