Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
UBE3AQ05086 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
UBE3AQ05086 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
UBE3AQ05086 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
UBE3AQ05086 SLC16A1P1-201ENST00000486743 1510 ntBASIC8.32□□□□□ -1.08
UBE3AQ05086 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC8.32□□□□□ -1.08
UBE3AQ05086 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
UBE3AQ05086 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
UBE3AQ05086 GSG1-203ENST00000396302 1628 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
UBE3AQ05086 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC8.32□□□□□ -1.08
UBE3AQ05086 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
UBE3AQ05086 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
UBE3AQ05086 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC8.32□□□□□ -1.08
UBE3AQ05086 AC068044.1-201ENST00000441585 1978 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC8.31□□□□□ -1.08
UBE3AQ05086 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 RNA5SP448-201ENST00000363151 111 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 VDAC1P8-201ENST00000406025 853 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 PPIAP30-201ENST00000415473 519 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC8.31□□□□□ -1.08
UBE3AQ05086 FECHP1-201ENST00000431896 1214 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 PA2G4P1-201ENST00000442248 1197 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 PSPC1P1-201ENST00000442352 665 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 RPS7P4-201ENST00000444127 582 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 GCNT1P5-201ENST00000449274 682 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC8.31□□□□□ -1.08
UBE3AQ05086 AL357037.1-201ENST00000454758 322 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 RN7SL55P-201ENST00000464534 297 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 MTCO1P55-201ENST00000489829 745 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 RN7SL516P-201ENST00000496127 297 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC8.31□□□□□ -1.08
UBE3AQ05086 AC013457.1-201ENST00000556770 1011 ntTSL 3 BASIC8.31□□□□□ -1.08
UBE3AQ05086 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC8.31□□□□□ -1.08
UBE3AQ05086 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC8.31□□□□□ -1.08
UBE3AQ05086 AC024614.1-201ENST00000577546 307 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 AC022001.1-201ENST00000605193 268 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC8.31□□□□□ -1.08
UBE3AQ05086 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC8.31□□□□□ -1.08
UBE3AQ05086 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC8.31□□□□□ -1.08
UBE3AQ05086 MAATS1-201ENST00000273390 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 HSPD1P4-201ENST00000547203 1702 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 SLC24A1-203ENST00000399033 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
UBE3AQ05086 AC104083.1-201ENST00000569449 2615 ntBASIC8.31□□□□□ -1.08
UBE3AQ05086 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
UBE3AQ05086 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC8.3□□□□□ -1.08
UBE3AQ05086 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.3□□□□□ -1.08
UBE3AQ05086 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC8.3□□□□□ -1.08
UBE3AQ05086 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE3AQ05086 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE3AQ05086 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE3AQ05086 SLC25A5P7-201ENST00000406156 896 ntBASIC8.3□□□□□ -1.08
UBE3AQ05086 BECN1P2-201ENST00000407947 812 ntBASIC8.3□□□□□ -1.08
UBE3AQ05086 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
UBE3AQ05086 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC8.3□□□□□ -1.08
UBE3AQ05086 SATB1-AS1-202ENST00000425799 611 ntTSL 5 BASIC8.3□□□□□ -1.08
UBE3AQ05086 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.3□□□□□ -1.08
UBE3AQ05086 PRKAR1AP1-201ENST00000441422 1162 ntBASIC8.3□□□□□ -1.08
UBE3AQ05086 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.3□□□□□ -1.08
UBE3AQ05086 PPP1R8P1-201ENST00000452549 1044 ntBASIC8.3□□□□□ -1.08
UBE3AQ05086 MRPS21P1-201ENST00000453850 223 ntBASIC8.3□□□□□ -1.08
UBE3AQ05086 RN7SL776P-201ENST00000493390 268 ntBASIC8.3□□□□□ -1.08
UBE3AQ05086 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
UBE3AQ05086 AC109439.1-201ENST00000511236 715 ntBASIC8.3□□□□□ -1.08
UBE3AQ05086 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC8.3□□□□□ -1.08
UBE3AQ05086 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.3□□□□□ -1.08
UBE3AQ05086 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC8.3□□□□□ -1.08
UBE3AQ05086 OR5AH1P-201ENST00000595968 283 ntBASIC8.3□□□□□ -1.08
UBE3AQ05086 RPS11-203ENST00000596873 583 ntTSL 2 BASIC8.3□□□□□ -1.08
UBE3AQ05086 AC244100.4-201ENST00000617747 388 ntBASIC8.3□□□□□ -1.08
UBE3AQ05086 FGL2-202ENST00000637771 989 ntBASIC8.3□□□□□ -1.08
UBE3AQ05086 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
UBE3AQ05086 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
UBE3AQ05086 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
UBE3AQ05086 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC8.3□□□□□ -1.08
UBE3AQ05086 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
UBE3AQ05086 AC027313.1-201ENST00000509159 1666 ntBASIC8.3□□□□□ -1.08
UBE3AQ05086 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
UBE3AQ05086 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
UBE3AQ05086 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
UBE3AQ05086 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
UBE3AQ05086 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
UBE3AQ05086 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC8.29□□□□□ -1.08
UBE3AQ05086 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
UBE3AQ05086 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
UBE3AQ05086 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC8.29□□□□□ -1.08
UBE3AQ05086 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms