Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 YES1P1-201ENST00000418510 1628 ntBASIC8.17□□□□□ -1.1
NID1P14543 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC8.17□□□□□ -1.1
NID1P14543 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC8.17□□□□□ -1.1
NID1P14543 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NID1P14543 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
NID1P14543 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC8.16□□□□□ -1.1
NID1P14543 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
NID1P14543 DEFA5-201ENST00000330590 449 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 RN7SKP22-201ENST00000365097 293 ntBASIC8.16□□□□□ -1.1
NID1P14543 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC8.16□□□□□ -1.1
NID1P14543 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 SERPINB9-201ENST00000380698 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 RNU6-354P-201ENST00000383862 107 ntBASIC8.16□□□□□ -1.1
NID1P14543 RNU6-610P-201ENST00000384264 107 ntBASIC8.16□□□□□ -1.1
NID1P14543 RNU6-636P-201ENST00000384598 107 ntBASIC8.16□□□□□ -1.1
NID1P14543 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 AL021407.1-201ENST00000404531 386 ntBASIC8.16□□□□□ -1.1
NID1P14543 GEMIN6-203ENST00000409566 834 ntTSL 2 BASIC8.16□□□□□ -1.1
NID1P14543 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC8.16□□□□□ -1.1
NID1P14543 RPSAP21-201ENST00000414293 885 ntBASIC8.16□□□□□ -1.1
NID1P14543 UBE2V1P9-201ENST00000414760 368 ntBASIC8.16□□□□□ -1.1
NID1P14543 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC8.16□□□□□ -1.1
NID1P14543 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC8.16□□□□□ -1.1
NID1P14543 MTCO1P52-201ENST00000433928 531 ntBASIC8.16□□□□□ -1.1
NID1P14543 MTAPP2-201ENST00000437063 832 ntBASIC8.16□□□□□ -1.1
NID1P14543 AC010967.3-201ENST00000438648 213 ntBASIC8.16□□□□□ -1.1
NID1P14543 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC8.16□□□□□ -1.1
NID1P14543 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC8.16□□□□□ -1.1
NID1P14543 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC8.16□□□□□ -1.1
NID1P14543 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 MCHR2-AS1-204ENST00000452482 821 ntTSL 3 BASIC8.16□□□□□ -1.1
NID1P14543 HMGB1P26-201ENST00000452520 628 ntBASIC8.16□□□□□ -1.1
NID1P14543 NBPF2P-201ENST00000453025 661 ntBASIC8.16□□□□□ -1.1
NID1P14543 AC096915.1-201ENST00000456185 512 ntBASIC8.16□□□□□ -1.1
NID1P14543 RN7SL749P-201ENST00000460421 290 ntBASIC8.16□□□□□ -1.1
NID1P14543 RN7SL420P-201ENST00000463843 298 ntBASIC8.16□□□□□ -1.1
NID1P14543 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 RPS17P11-201ENST00000474297 293 ntBASIC8.16□□□□□ -1.1
NID1P14543 ACTG1P20-201ENST00000486001 468 ntBASIC8.16□□□□□ -1.1
NID1P14543 RPL21P131-201ENST00000497298 483 ntBASIC8.16□□□□□ -1.1
NID1P14543 C16orf62-205ENST00000513947 2501 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 AC023946.1-201ENST00000526867 594 ntTSL 3 BASIC8.16□□□□□ -1.1
NID1P14543 DDX18P5-201ENST00000534547 1306 ntBASIC8.16□□□□□ -1.1
NID1P14543 FDPSP4-201ENST00000534629 1049 ntBASIC8.16□□□□□ -1.1
NID1P14543 ACTR3C-205ENST00000539352 570 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC8.16□□□□□ -1.1
NID1P14543 AP000619.2-201ENST00000546014 969 ntBASIC8.16□□□□□ -1.1
NID1P14543 AC055716.3-201ENST00000547533 761 ntTSL 3 BASIC8.16□□□□□ -1.1
NID1P14543 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC8.16□□□□□ -1.1
NID1P14543 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC8.16□□□□□ -1.1
NID1P14543 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC8.16□□□□□ -1.1
NID1P14543 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC8.16□□□□□ -1.1
NID1P14543 AC109630.1-201ENST00000558846 730 ntTSL 3 BASIC8.16□□□□□ -1.1
NID1P14543 AC025280.1-201ENST00000562393 260 ntTSL 2 BASIC8.16□□□□□ -1.1
NID1P14543 AC034105.5-201ENST00000564017 314 ntBASIC8.16□□□□□ -1.1
NID1P14543 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC8.16□□□□□ -1.1
NID1P14543 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 AC007785.3-201ENST00000595955 544 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 OR7A11P-201ENST00000597719 953 ntBASIC8.16□□□□□ -1.1
NID1P14543 AP001981.2-201ENST00000603241 418 ntBASIC8.16□□□□□ -1.1
NID1P14543 AC083862.2-201ENST00000608819 1145 ntBASIC8.16□□□□□ -1.1
NID1P14543 PART1_2.1-201ENST00000612397 250 ntBASIC8.16□□□□□ -1.1
NID1P14543 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 LINC02028-221ENST00000622169 621 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 AC010435.1-201ENST00000623353 1177 ntBASIC8.16□□□□□ -1.1
NID1P14543 AC124312.6-202ENST00000623624 418 ntBASIC8.16□□□□□ -1.1
NID1P14543 AD000813.1-201ENST00000624007 832 ntBASIC8.16□□□□□ -1.1
NID1P14543 AC092656.1-203ENST00000624134 423 ntBASIC8.16□□□□□ -1.1
NID1P14543 AC012020.1-201ENST00000624541 1728 ntBASIC8.16□□□□□ -1.1
NID1P14543 PKP4-218ENST00000629219 162 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 AL133464.1-204ENST00000634280 1094 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.16□□□□□ -1.1
NID1P14543 ERCC6-201ENST00000355832 8008 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NID1P14543 RNASE9-207ENST00000555230 2668 ntAPPRIS P3 TSL 2 BASIC8.16□□□□□ -1.1
NID1P14543 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
NID1P14543 CBWD1-205ENST00000382389 1807 ntTSL 2 BASIC8.15□□□□□ -1.1
NID1P14543 XIST-211ENST00000635841 1734 ntTSL 5 BASIC8.15□□□□□ -1.1
NID1P14543 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 SPP1-201ENST00000237623 1581 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 AL135903.1-201ENST00000402742 1590 ntBASIC8.15□□□□□ -1.1
NID1P14543 AC099654.3-201ENST00000447087 1546 ntBASIC8.15□□□□□ -1.1
NID1P14543 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NID1P14543 GSDMB-204ENST00000394179 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms