Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 PPID-201ENST00000307720 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 RBSN-201ENST00000253699 6678 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 ZNF471-201ENST00000308031 6287 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 SEMA6A-201ENST00000257414 4256 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LRCH3Q96II8 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 CABYR-218ENST00000627314 1622 ntTSL 2 BASIC9.93□□□□□ -0.82
LRCH3Q96II8 PRR23D2-201ENST00000528972 1587 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 PRR23D1-201ENST00000533250 1587 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 LEP-201ENST00000308868 3420 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 PRAMEF10-201ENST00000235347 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 PRAMEF33-201ENST00000437300 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 RNF38-206ENST00000377885 4985 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 ATL1-201ENST00000358385 2647 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 SLU7-201ENST00000297151 3793 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 SEMA3E-201ENST00000307792 6476 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 TCTN3-203ENST00000371217 2514 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 RAD17-205ENST00000354868 3060 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC010132.4-201ENST00000569883 1368 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 EGFLAM-203ENST00000354891 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 Z74696.1-201ENST00000428208 1123 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 LENG8-AS1-202ENST00000429922 871 ntTSL 4 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 PHBP4-201ENST00000437447 837 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC000041.1-201ENST00000439655 175 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 MTND5P14-201ENST00000441481 1267 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC112653.1-201ENST00000443851 386 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 SFTPA3P-201ENST00000446429 367 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 LINC01883-201ENST00000457385 380 ntTSL 2 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 C3orf67-AS1-201ENST00000463703 562 ntTSL 4 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 DUBR-203ENST00000473550 738 ntTSL 3 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC026254.1-201ENST00000479473 431 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC004815.1-201ENST00000484185 331 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 RN7SKP5-201ENST00000517045 272 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 DCTN6-203ENST00000520829 880 ntTSL 2 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 MED28P5-201ENST00000528254 438 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 SSR2-215ENST00000529008 849 ntTSL 5 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 NTAN1P3-201ENST00000535885 715 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC090695.1-201ENST00000561269 1222 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 AL138976.2-201ENST00000563989 694 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC006557.4-201ENST00000585516 830 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 EIF4A2P1-201ENST00000587313 1063 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC119501.1-201ENST00000603646 475 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 AC018558.4-201ENST00000622153 281 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 CD3EAP-201ENST00000309424 3286 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 PC-203ENST00000393960 4192 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 ZNF418-201ENST00000396147 3694 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 EDNRA-201ENST00000324300 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 XRCC2-201ENST00000359321 3067 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 AP005139.1-201ENST00000580702 1647 ntBASIC9.92□□□□□ -0.82
LRCH3Q96II8 VIT-201ENST00000379241 2525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 OTUD6B-205ENST00000615618 3434 ntTSL 2 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 KIAA1328-203ENST00000586501 1577 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 LINC01734-201ENST00000412672 1518 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LRCH3Q96II8 CREM-212ENST00000374728 1933 ntTSL 5 BASIC9.92□□□□□ -0.82
LRCH3Q96II8 SYNE1-203ENST00000354674 3154 ntTSL 5 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 ZNF304-202ENST00000391705 4313 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 HAL-203ENST00000541929 3846 ntTSL 2 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 UNC119-205ENST00000484980 4189 ntTSL 2 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 AC090616.7-201ENST00000625123 2179 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 SLFN11-201ENST00000308377 4910 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 TGIF2-208ENST00000611732 3344 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 DYRK4-211ENST00000540757 3272 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LRCH3Q96II8 TIMELESS-201ENST00000229201 4376 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 MIR128-2-201ENST00000384893 84 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 MIR654-201ENST00000385199 81 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 SNORA26.8-201ENST00000391306 124 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC9.91□□□□□ -0.82
LRCH3Q96II8 RSL24D1P4-201ENST00000400938 484 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 NUS1P4-201ENST00000401550 585 ntBASIC9.91□□□□□ -0.82
LRCH3Q96II8 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms