Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AP001342.1-201ENST00000423389 525 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 FTH1P10-202ENST00000430907 550 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC7.37□□□□□ -1.23
SCN2BO60939 AL022721.1-201ENST00000436521 505 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC7.37□□□□□ -1.23
SCN2BO60939 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC7.37□□□□□ -1.23
SCN2BO60939 PTMAP1-205ENST00000455552 325 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 AC013787.1-201ENST00000460165 307 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 RN7SL687P-201ENST00000480496 285 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 AC107385.1-201ENST00000507985 778 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC7.37□□□□□ -1.23
SCN2BO60939 BTF3P1-201ENST00000522014 495 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC7.37□□□□□ -1.23
SCN2BO60939 AC025419.1-202ENST00000535315 744 ntTSL 3 BASIC7.37□□□□□ -1.23
SCN2BO60939 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC7.37□□□□□ -1.23
SCN2BO60939 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC7.37□□□□□ -1.23
SCN2BO60939 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC7.37□□□□□ -1.23
SCN2BO60939 AC012301.1-201ENST00000586391 581 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 AC011476.3-201ENST00000593060 786 ntTSL 5 BASIC7.37□□□□□ -1.23
SCN2BO60939 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC7.37□□□□□ -1.23
SCN2BO60939 AC211469.1-201ENST00000604263 394 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 AC010680.5-201ENST00000605021 463 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 BX649601.1-201ENST00000608264 572 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 CGA-202ENST00000610310 615 ntTSL 3 BASIC7.37□□□□□ -1.23
SCN2BO60939 AC016999.2-201ENST00000614692 556 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 MIR6834-201ENST00000622807 81 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 OR2A20P-201ENST00000479887 2913 ntBASIC7.37□□□□□ -1.23
SCN2BO60939 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 LINC01800-201ENST00000445865 1977 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
SCN2BO60939 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.37□□□□□ -1.23
SCN2BO60939 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN2BO60939 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SCN2BO60939 PRNCR1-201ENST00000635449 12727 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 EPHA4-201ENST00000281821 6346 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SCN2BO60939 AC114786.2-201ENST00000510090 1426 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 ZNF300P1-201ENST00000356555 1822 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 EEF1A1P3-201ENST00000417549 1385 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
SCN2BO60939 AC104581.5-201ENST00000624171 7141 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
SCN2BO60939 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
SCN2BO60939 FO393411.1-201ENST00000325612 420 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN2BO60939 RN7SKP50-201ENST00000364694 315 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.36□□□□□ -1.23
SCN2BO60939 ATP13A4-AS1-201ENST00000426459 795 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN2BO60939 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.36□□□□□ -1.23
SCN2BO60939 RPL3P8-201ENST00000432928 1191 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN2BO60939 AC092447.7-202ENST00000443198 580 ntTSL 2 BASIC7.36□□□□□ -1.23
SCN2BO60939 SUMO2P10-201ENST00000452006 288 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 RN7SL870P-201ENST00000460111 296 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 LINC02148-201ENST00000503877 1223 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN2BO60939 AC083902.1-201ENST00000508578 359 ntTSL 5 BASIC7.36□□□□□ -1.23
SCN2BO60939 CA1-219ENST00000523022 1208 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 ZNF345-205ENST00000526123 458 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN2BO60939 AC090589.2-201ENST00000532022 332 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN2BO60939 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC7.36□□□□□ -1.23
SCN2BO60939 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC7.36□□□□□ -1.23
SCN2BO60939 CRADD-211ENST00000552983 839 ntTSL 5 BASIC7.36□□□□□ -1.23
SCN2BO60939 FDPSP3-201ENST00000556903 1013 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN2BO60939 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN2BO60939 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN2BO60939 AC004918.3-201ENST00000602609 925 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 AL390882.1-201ENST00000618821 594 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 AC012557.3-201ENST00000626439 255 ntBASIC7.36□□□□□ -1.23
SCN2BO60939 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC7.36□□□□□ -1.23
SCN2BO60939 ZSCAN9-207ENST00000531979 1601 ntAPPRIS P3 TSL 2 BASIC7.36□□□□□ -1.23
SCN2BO60939 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.36□□□□□ -1.23
SCN2BO60939 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
SCN2BO60939 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN2BO60939 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
SCN2BO60939 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms