Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL035555.1-201ENST00000404462 1790 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 TTC3P1-201ENST00000399586 6081 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 ZSWIM5P3-201ENST00000511265 2743 ntBASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC01519-201ENST00000454178 2029 ntTSL 5 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 CREM-218ENST00000460270 1416 ntTSL 2 BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CDK5RAP1Q96SZ6 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 MAPK10-313ENST00000641405 2469 ntBASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AC020978.8-201ENST00000571975 3022 ntBASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 CASC20-201ENST00000415932 1484 ntTSL 5 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 MITD1-201ENST00000289359 939 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 ST13P13-201ENST00000417082 1092 ntBASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AC010983.1-201ENST00000418387 1028 ntTSL 5 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 RPL4P4-201ENST00000422486 1284 ntBASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 EFCAB14P1-201ENST00000442409 463 ntBASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 GCNT1P5-201ENST00000449274 682 ntBASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AL157714.2-204ENST00000452283 973 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AC107956.2-201ENST00000496042 454 ntBASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AC092868.1-201ENST00000557949 802 ntBASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AC090607.2-201ENST00000560331 695 ntBASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC02544-201ENST00000564830 544 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 RN7SL760P-201ENST00000607344 270 ntBASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 AL157359.3-201ENST00000623771 217 ntBASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 TRIM49-202ENST00000532501 1437 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 MAPK10-343ENST00000641677 2546 ntBASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.28□□□□□ -1.08
CDK5RAP1Q96SZ6 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.08
CDK5RAP1Q96SZ6 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
CDK5RAP1Q96SZ6 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 FAM47C-201ENST00000358047 3270 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 MSRB1P1-201ENST00000396851 354 ntBASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AL022332.1-201ENST00000411511 428 ntTSL 5 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 OR10U1P-201ENST00000414690 905 ntBASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 PAICSP1-201ENST00000425324 1217 ntBASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AL136454.1-201ENST00000443181 466 ntBASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 CSNK1A1P3-201ENST00000504105 330 ntBASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AC136604.3-202ENST00000514793 485 ntTSL 5 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 ZNF726-203ENST00000525354 806 ntTSL 2 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AP000793.1-201ENST00000527364 740 ntTSL 3 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 SERPINA15P-201ENST00000529287 266 ntBASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 OR4A7P-201ENST00000531463 910 ntBASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AF186192.2-204ENST00000581667 524 ntBASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AC008738.6-201ENST00000604605 569 ntTSL 4 BASIC8.27□□□□□ -1.09
CDK5RAP1Q96SZ6 AL023583.1-201ENST00000607518 1143 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms