Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 OR2AI1P-201ENST00000448534 932 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 SEPHS1P7-201ENST00000452995 1177 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 RPL34P29-201ENST00000491411 325 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC008676.3-201ENST00000521237 435 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 IGLVI-70-201ENST00000523272 390 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC021006.2-201ENST00000526978 859 ntTSL 3 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC069235.1-202ENST00000545535 540 ntTSL 3 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 OTX2-204ENST00000554788 835 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC112484.4-201ENST00000567253 811 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC061975.4-201ENST00000578466 776 ntTSL 3 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC010327.2-201ENST00000587647 488 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 Z93930.3-201ENST00000607919 749 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC131159.2-201ENST00000613236 702 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 LINC01727-204ENST00000624385 940 ntTSL 5 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC079602.4-201ENST00000637836 532 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 SPATA7-201ENST00000045347 1410 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 ABCA9-207ENST00000495634 1428 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 AC114786.2-201ENST00000510090 1426 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 UGT2B25P-201ENST00000511504 1586 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC7.32□□□□□ -1.24
SNX18Q96RF0 SALL4P7-201ENST00000555779 3120 ntBASIC7.32□□□□□ -1.24
SNX18Q96RF0 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SNX18Q96RF0 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 OR2T4-202ENST00000366475 1047 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 ZNF816-ZNF321P-201ENST00000391777 1252 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 AL139274.1-201ENST00000402374 936 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 TIMD4-202ENST00000406964 581 ntTSL 2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 FAF2P1-201ENST00000429974 1298 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 RPS10P2-201ENST00000430953 494 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 MYB-AS1-201ENST00000455534 449 ntTSL 2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 AC108039.1-201ENST00000456719 609 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 RN7SL218P-201ENST00000464637 299 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 RN7SL146P-201ENST00000472338 297 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 RN7SL745P-201ENST00000484900 299 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 RWDD1-204ENST00000487832 1427 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SNX18Q96RF0 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 PSAT1P1-201ENST00000518968 1106 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 LINC01499-201ENST00000528720 553 ntTSL 4 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 AC005552.1-201ENST00000577556 662 ntBASIC7.31□□□□□ -1.24
SNX18Q96RF0 AC060766.7-201ENST00000587012 1212 ntTSL 3 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 AP005131.4-202ENST00000590468 570 ntTSL 4 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 PROX1-AS1-208ENST00000601335 691 ntTSL 5 BASIC7.31□□□□□ -1.24
SNX18Q96RF0 VDAC1P5-201ENST00000603132 844 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms