Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAI2Q9Y5P3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAI2Q9Y5P3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAI2Q9Y5P3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
RAI2Q9Y5P3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAI2Q9Y5P3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.4■□□□□ 0.86
RAI2Q9Y5P3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RAI2Q9Y5P3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.4■□□□□ 0.86
RAI2Q9Y5P3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.4■□□□□ 0.86
RAI2Q9Y5P3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.4■□□□□ 0.86
RAI2Q9Y5P3 AP006294.2-201ENST00000641667 209 ntBASIC20.4■□□□□ 0.86
RAI2Q9Y5P3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RAI2Q9Y5P3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAI2Q9Y5P3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.39■□□□□ 0.86
RAI2Q9Y5P3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAI2Q9Y5P3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.39■□□□□ 0.86
RAI2Q9Y5P3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RAI2Q9Y5P3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 AC092667.1-201ENST00000434301 2586 ntBASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 AC083880.1-201ENST00000608266 535 ntBASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 GABARAPL3-202ENST00000624044 1851 ntBASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAI2Q9Y5P3 DPP3P2-201ENST00000416030 1696 ntBASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAI2Q9Y5P3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 LINC01006-201ENST00000333319 2292 ntBASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAI2Q9Y5P3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
RAI2Q9Y5P3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAI2Q9Y5P3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms