Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHGA4Q9Y5G9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
PCDHGA4Q9Y5G9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PCDHGA4Q9Y5G9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 AC091874.3-201ENST00000512672 1195 ntBASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA4Q9Y5G9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 AC128676.1-201ENST00000454392 318 ntBASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 AC142381.4-202ENST00000563973 229 ntBASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA4Q9Y5G9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 AL596275.1-201ENST00000423464 877 ntBASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 RPS2P4-201ENST00000476944 856 ntBASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
PCDHGA4Q9Y5G9 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 AL591742.1-201ENST00000604433 565 ntBASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGA4Q9Y5G9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 AL162412.1-201ENST00000567129 965 ntBASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 AC116050.2-201ENST00000612102 1779 ntBASIC19.78■□□□□ 0.76
PCDHGA4Q9Y5G9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 AC010980.2-201ENST00000587099 1412 ntBASIC19.77■□□□□ 0.76
PCDHGA4Q9Y5G9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms