Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
YIPF1Q9Y548 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 AL121603.2-201ENST00000557373 2117 ntBASIC21.15■□□□□ 0.98
YIPF1Q9Y548 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.15■□□□□ 0.98
YIPF1Q9Y548 PTBP1P-201ENST00000554374 1601 ntBASIC21.15■□□□□ 0.98
YIPF1Q9Y548 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
YIPF1Q9Y548 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
YIPF1Q9Y548 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
YIPF1Q9Y548 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.14■□□□□ 0.98
YIPF1Q9Y548 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
YIPF1Q9Y548 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.14■□□□□ 0.98
YIPF1Q9Y548 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.14■□□□□ 0.97
YIPF1Q9Y548 AL049637.2-201ENST00000641778 930 ntBASIC21.14■□□□□ 0.97
YIPF1Q9Y548 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
YIPF1Q9Y548 AL135905.2-201ENST00000584934 1404 ntBASIC21.13■□□□□ 0.97
YIPF1Q9Y548 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 TSPY7P-201ENST00000431358 1114 ntBASIC21.13■□□□□ 0.97
YIPF1Q9Y548 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 RARRES2P10-201ENST00000564312 460 ntBASIC21.13■□□□□ 0.97
YIPF1Q9Y548 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
YIPF1Q9Y548 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 AL121906.2-201ENST00000621597 723 ntBASIC21.12■□□□□ 0.97
YIPF1Q9Y548 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.12■□□□□ 0.97
YIPF1Q9Y548 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
YIPF1Q9Y548 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
YIPF1Q9Y548 HLA-G-202ENST00000376815 851 ntBASIC21.11■□□□□ 0.97
YIPF1Q9Y548 HLA-G-203ENST00000376818 1127 ntBASIC21.11■□□□□ 0.97
YIPF1Q9Y548 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.11■□□□□ 0.97
YIPF1Q9Y548 AC113410.3-201ENST00000623366 203 ntBASIC21.11■□□□□ 0.97
YIPF1Q9Y548 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
YIPF1Q9Y548 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
YIPF1Q9Y548 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.11■□□□□ 0.97
YIPF1Q9Y548 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.11■□□□□ 0.97
YIPF1Q9Y548 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.1■□□□□ 0.97
YIPF1Q9Y548 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YIPF1Q9Y548 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.1■□□□□ 0.97
YIPF1Q9Y548 LINC00565-201ENST00000562710 2331 ntBASIC21.1■□□□□ 0.97
YIPF1Q9Y548 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms