Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.66■□□□□ 0.58
TMCC3Q9ULS5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.65■□□□□ 0.58
TMCC3Q9ULS5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMCC3Q9ULS5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMCC3Q9ULS5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TMCC3Q9ULS5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TMCC3Q9ULS5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 AC010141.2-201ENST00000452426 721 ntBASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TMCC3Q9ULS5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 MIR6084-201ENST00000622012 110 ntBASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TMCC3Q9ULS5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TMCC3Q9ULS5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMCC3Q9ULS5 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMCC3Q9ULS5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMCC3Q9ULS5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TMCC3Q9ULS5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
TMCC3Q9ULS5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TMCC3Q9ULS5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.61■□□□□ 0.57
TMCC3Q9ULS5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.61■□□□□ 0.57
TMCC3Q9ULS5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMCC3Q9ULS5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMCC3Q9ULS5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms