Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
MKRN1Q9UHC7 KRT8P9-201ENST00000558927 1449 ntBASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC24.52■■□□□ 1.52
MKRN1Q9UHC7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC24.51■■□□□ 1.51
MKRN1Q9UHC7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 SAPCD2P4-201ENST00000424595 1171 ntBASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 UPK3BP1-201ENST00000428678 509 ntBASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.5■■□□□ 1.51
MKRN1Q9UHC7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 TERF1P1-201ENST00000311003 1181 ntBASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 AL137013.1-201ENST00000432946 1228 ntBASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 NMU-205ENST00000511469 756 ntTSL 3 BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
MKRN1Q9UHC7 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 KRT126P-201ENST00000549467 1181 ntBASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 DUT-205ENST00000558813 769 ntTSL 2 BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.48■■□□□ 1.51
MKRN1Q9UHC7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms