Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 AC005082.1-201ENST00000413042 2259 ntBASIC18.66■□□□□ 0.58
SMPD3Q9NY59 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMPD3Q9NY59 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SMPD3Q9NY59 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMPD3Q9NY59 AC061975.6-201ENST00000579045 1553 ntBASIC18.64■□□□□ 0.58
SMPD3Q9NY59 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.64■□□□□ 0.58
SMPD3Q9NY59 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SMPD3Q9NY59 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.64■□□□□ 0.57
SMPD3Q9NY59 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 SERBP1P1-201ENST00000396021 1160 ntBASIC18.64■□□□□ 0.57
SMPD3Q9NY59 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 AL356740.2-201ENST00000601559 647 ntBASIC18.64■□□□□ 0.57
SMPD3Q9NY59 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMPD3Q9NY59 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 BX119927.1-201ENST00000636596 1552 ntBASIC18.63■□□□□ 0.57
SMPD3Q9NY59 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.63■□□□□ 0.57
SMPD3Q9NY59 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.62■□□□□ 0.57
SMPD3Q9NY59 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 AC005224.4-201ENST00000583262 1652 ntBASIC18.62■□□□□ 0.57
SMPD3Q9NY59 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMPD3Q9NY59 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms