Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 AL355802.2-201ENST00000402069 882 ntBASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 AL355472.2-201ENST00000422958 438 ntBASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 AL138781.1-201ENST00000566567 1274 ntBASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
NECTIN3Q9NQS3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 MIPEPP3-201ENST00000412105 444 ntBASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NECTIN3Q9NQS3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
NECTIN3Q9NQS3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NECTIN3Q9NQS3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.27■□□□□ 0.67
NECTIN3Q9NQS3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 PLK5-205ENST00000642079 1969 ntBASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 BX276092.2-201ENST00000417668 665 ntBASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 AC100791.3-201ENST00000617619 330 ntBASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 CYP21A1P-202ENST00000354927 1481 ntBASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 GABARAPL3-202ENST00000624044 1851 ntBASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NECTIN3Q9NQS3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 AC142086.2-201ENST00000569753 217 ntBASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.25■□□□□ 0.67
NECTIN3Q9NQS3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NECTIN3Q9NQS3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms