Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1G1Q9HCP0 HLA-G-202ENST00000376815 851 ntBASIC21.15■□□□□ 0.98
CSNK1G1Q9HCP0 HLA-G-203ENST00000376818 1127 ntBASIC21.15■□□□□ 0.98
CSNK1G1Q9HCP0 KRT17P3-201ENST00000420566 1262 ntBASIC21.15■□□□□ 0.98
CSNK1G1Q9HCP0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1G1Q9HCP0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.15■□□□□ 0.98
CSNK1G1Q9HCP0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
CSNK1G1Q9HCP0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1G1Q9HCP0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CSNK1G1Q9HCP0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.15■□□□□ 0.98
CSNK1G1Q9HCP0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CSNK1G1Q9HCP0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.14■□□□□ 0.98
CSNK1G1Q9HCP0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CSNK1G1Q9HCP0 AC020907.5-201ENST00000624372 1936 ntBASIC21.14■□□□□ 0.98
CSNK1G1Q9HCP0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CSNK1G1Q9HCP0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 AC073314.1-201ENST00000568729 2216 ntBASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CSNK1G1Q9HCP0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 AP005212.1-201ENST00000581547 1997 ntBASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 AC233263.1-201ENST00000578059 224 ntBASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 AC069544.1-201ENST00000609399 999 ntBASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CSNK1G1Q9HCP0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 FEM1AP1-201ENST00000431297 1995 ntBASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CSNK1G1Q9HCP0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 AC098590.1-201ENST00000468126 897 ntBASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.1■□□□□ 0.97
CSNK1G1Q9HCP0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CSNK1G1Q9HCP0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms