Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLR1BQ9H9Y6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 AC091799.1-201ENST00000422823 811 ntBASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 C1QBPP2-201ENST00000528754 825 ntBASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.87■□□□□ 0.77
POLR1BQ9H9Y6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 AC245052.3-201ENST00000450182 901 ntBASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 PNMA6B-201ENST00000538162 1200 ntBASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 MIR4497-201ENST00000583208 89 ntBASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLR1BQ9H9Y6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.85■□□□□ 0.77
POLR1BQ9H9Y6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 MCRIP2P1-201ENST00000394346 511 ntBASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.84■□□□□ 0.77
POLR1BQ9H9Y6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 RN7SL471P-201ENST00000580476 299 ntBASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 AC073912.3-201ENST00000624414 853 ntBASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.83■□□□□ 0.77
POLR1BQ9H9Y6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
POLR1BQ9H9Y6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms