Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 AC007952.6-201ENST00000573168 2673 ntBASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 AC003957.1-201ENST00000625108 2673 ntBASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 AC098934.4-201ENST00000564127 592 ntBASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SUDS3Q9H7L9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 MKRN4P-201ENST00000444706 1521 ntBASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 AC007322.4-201ENST00000509611 723 ntBASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 AL591742.1-201ENST00000604433 565 ntBASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 AC027702.1-201ENST00000563810 1770 ntBASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SUDS3Q9H7L9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SUDS3Q9H7L9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
SUDS3Q9H7L9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.87
SUDS3Q9H7L9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SUDS3Q9H7L9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.52■□□□□ 0.87
SUDS3Q9H7L9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 AC007322.3-201ENST00000426526 701 ntBASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 AC133552.2-202ENST00000575694 574 ntBASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.51■□□□□ 0.87
SUDS3Q9H7L9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SUDS3Q9H7L9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUDS3Q9H7L9 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUDS3Q9H7L9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUDS3Q9H7L9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SUDS3Q9H7L9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SUDS3Q9H7L9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.5■□□□□ 0.87
SUDS3Q9H7L9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.5■□□□□ 0.87
SUDS3Q9H7L9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUDS3Q9H7L9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SUDS3Q9H7L9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SUDS3Q9H7L9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SUDS3Q9H7L9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms