Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GSX1Q9H4S2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 RARRES2P10-201ENST00000564312 460 ntBASIC17.1■□□□□ 0.33
GSX1Q9H4S2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GSX1Q9H4S2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 FBXW4P1-201ENST00000426721 2239 ntBASIC17.09■□□□□ 0.33
GSX1Q9H4S2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
GSX1Q9H4S2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.08■□□□□ 0.33
GSX1Q9H4S2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GSX1Q9H4S2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
GSX1Q9H4S2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GSX1Q9H4S2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 AC145285.6-201ENST00000604632 637 ntBASIC17.08■□□□□ 0.32
GSX1Q9H4S2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.08■□□□□ 0.32
GSX1Q9H4S2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 AL355355.2-201ENST00000442321 338 ntBASIC17.07■□□□□ 0.32
GSX1Q9H4S2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 AC087388.1-201ENST00000571370 1112 ntBASIC17.07■□□□□ 0.32
GSX1Q9H4S2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 AC137767.1-201ENST00000602918 1920 ntBASIC17.07■□□□□ 0.32
GSX1Q9H4S2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GSX1Q9H4S2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSX1Q9H4S2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GSX1Q9H4S2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.06■□□□□ 0.32
GSX1Q9H4S2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GSX1Q9H4S2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.06■□□□□ 0.32
GSX1Q9H4S2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GSX1Q9H4S2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms