Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COMMD4Q9H0A8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
COMMD4Q9H0A8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.77■□□□□ 0.44
COMMD4Q9H0A8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
COMMD4Q9H0A8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.77■□□□□ 0.44
COMMD4Q9H0A8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.77■□□□□ 0.44
COMMD4Q9H0A8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
COMMD4Q9H0A8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.77■□□□□ 0.44
COMMD4Q9H0A8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COMMD4Q9H0A8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.77■□□□□ 0.43
COMMD4Q9H0A8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.77■□□□□ 0.43
COMMD4Q9H0A8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
COMMD4Q9H0A8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
COMMD4Q9H0A8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 DUX4L2-201ENST00000561772 1275 ntBASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 MIR6084-201ENST00000622012 110 ntBASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 DUX4L6-201ENST00000626483 1275 ntBASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 DUX4L1-201ENST00000627662 1275 ntBASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 DUX4L8-201ENST00000629013 1275 ntBASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 DUX4L3-201ENST00000630187 1275 ntBASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 DUX4L7-201ENST00000630678 1275 ntBASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 DUX4L5-201ENST00000630834 1275 ntBASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.75■□□□□ 0.43
COMMD4Q9H0A8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 AC142381.2-201ENST00000566120 298 ntBASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
COMMD4Q9H0A8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms