Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PHACTR1Q9C0D0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PHACTR1Q9C0D0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.44■□□□□ 0.86
PHACTR1Q9C0D0 AC087633.2-202ENST00000565166 1439 ntBASIC20.44■□□□□ 0.86
PHACTR1Q9C0D0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.44■□□□□ 0.86
PHACTR1Q9C0D0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PHACTR1Q9C0D0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.44■□□□□ 0.86
PHACTR1Q9C0D0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PHACTR1Q9C0D0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.42■□□□□ 0.86
PHACTR1Q9C0D0 YBX1P1-201ENST00000445822 960 ntBASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 AC005332.7-201ENST00000614046 2005 ntBASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PHACTR1Q9C0D0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 AC009237.14-201ENST00000609975 1594 ntBASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 AL356652.1-201ENST00000615962 565 ntBASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PHACTR1Q9C0D0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PHACTR1Q9C0D0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PHACTR1Q9C0D0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PHACTR1Q9C0D0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PHACTR1Q9C0D0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PHACTR1Q9C0D0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHACTR1Q9C0D0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHACTR1Q9C0D0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.39■□□□□ 0.85
PHACTR1Q9C0D0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.39■□□□□ 0.85
PHACTR1Q9C0D0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PHACTR1Q9C0D0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.39■□□□□ 0.85
PHACTR1Q9C0D0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.39■□□□□ 0.85
PHACTR1Q9C0D0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms