Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 AC087633.2-202ENST00000565166 1439 ntBASIC18.54■□□□□ 0.56
TRIM2Q9C040 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
TRIM2Q9C040 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
TRIM2Q9C040 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM2Q9C040 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM2Q9C040 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM2Q9C040 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
TRIM2Q9C040 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRIM2Q9C040 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM2Q9C040 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM2Q9C040 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM2Q9C040 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM2Q9C040 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRIM2Q9C040 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.53■□□□□ 0.56
TRIM2Q9C040 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.53■□□□□ 0.56
TRIM2Q9C040 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM2Q9C040 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRIM2Q9C040 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM2Q9C040 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.53■□□□□ 0.56
TRIM2Q9C040 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM2Q9C040 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM2Q9C040 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM2Q9C040 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM2Q9C040 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM2Q9C040 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRIM2Q9C040 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM2Q9C040 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM2Q9C040 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM2Q9C040 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM2Q9C040 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM2Q9C040 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM2Q9C040 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM2Q9C040 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM2Q9C040 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM2Q9C040 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM2Q9C040 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM2Q9C040 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM2Q9C040 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM2Q9C040 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM2Q9C040 AL356652.1-201ENST00000615962 565 ntBASIC18.52■□□□□ 0.56
TRIM2Q9C040 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM2Q9C040 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRIM2Q9C040 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
TRIM2Q9C040 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TRIM2Q9C040 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM2Q9C040 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM2Q9C040 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
TRIM2Q9C040 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.52■□□□□ 0.55
TRIM2Q9C040 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM2Q9C040 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM2Q9C040 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM2Q9C040 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM2Q9C040 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM2Q9C040 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM2Q9C040 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM2Q9C040 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM2Q9C040 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM2Q9C040 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM2Q9C040 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM2Q9C040 MFSD11-216ENST00000590393 1141 ntBASIC18.51■□□□□ 0.55
TRIM2Q9C040 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.51■□□□□ 0.55
TRIM2Q9C040 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM2Q9C040 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRIM2Q9C040 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIM2Q9C040 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM2Q9C040 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM2Q9C040 SMG8-203ENST00000578922 2178 ntBASIC18.51■□□□□ 0.55
TRIM2Q9C040 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM2Q9C040 DPP3P2-201ENST00000416030 1696 ntBASIC18.5■□□□□ 0.55
TRIM2Q9C040 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM2Q9C040 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM2Q9C040 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TRIM2Q9C040 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM2Q9C040 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM2Q9C040 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM2Q9C040 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM2Q9C040 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRIM2Q9C040 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRIM2Q9C040 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM2Q9C040 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRIM2Q9C040 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM2Q9C040 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRIM2Q9C040 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM2Q9C040 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM2Q9C040 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM2Q9C040 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM2Q9C040 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM2Q9C040 CYP21A1P-202ENST00000354927 1481 ntBASIC18.5■□□□□ 0.55
TRIM2Q9C040 AL391422.3-201ENST00000603791 2761 ntBASIC18.5■□□□□ 0.55
TRIM2Q9C040 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM2Q9C040 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM2Q9C040 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM2Q9C040 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM2Q9C040 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms