Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 KRT8P45-201ENST00000414328 1447 ntBASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 AL390719.1-204ENST00000412397 1219 ntBASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 TSPY5P-201ENST00000426936 936 ntBASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 LINC02084-201ENST00000606069 1096 ntBASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 CYP21A1P-202ENST00000354927 1481 ntBASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CNTNAP3Q9BZ76 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 TSPY21P-201ENST00000433481 731 ntBASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 TSPY23P-201ENST00000440136 739 ntBASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 EGLN1P1-201ENST00000531623 762 ntBASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 ABCB10P4-201ENST00000566803 2184 ntBASIC19.25■□□□□ 0.67
CNTNAP3Q9BZ76 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 NBPF21P-201ENST00000425093 1451 ntBASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 PKD1P6-201ENST00000343738 4769 ntBASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 AL117328.2-201ENST00000624617 1940 ntBASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 KRT17P6-201ENST00000453795 1220 ntBASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNTNAP3Q9BZ76 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 AC245052.3-201ENST00000450182 901 ntBASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.23■□□□□ 0.67
CNTNAP3Q9BZ76 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNTNAP3Q9BZ76 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms