Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDC1Q9BTX1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NDC1Q9BTX1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDC1Q9BTX1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.25■□□□□ 0.67
NDC1Q9BTX1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDC1Q9BTX1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NDC1Q9BTX1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 AL390719.1-204ENST00000412397 1219 ntBASIC19.24■□□□□ 0.67
NDC1Q9BTX1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 AC128676.1-201ENST00000454392 318 ntBASIC19.24■□□□□ 0.67
NDC1Q9BTX1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 PLK5-205ENST00000642079 1969 ntBASIC19.24■□□□□ 0.67
NDC1Q9BTX1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.24■□□□□ 0.67
NDC1Q9BTX1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 KRT17P3-201ENST00000420566 1262 ntBASIC19.23■□□□□ 0.67
NDC1Q9BTX1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.23■□□□□ 0.67
NDC1Q9BTX1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
NDC1Q9BTX1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 PRORSD1P-201ENST00000295112 541 ntBASIC19.22■□□□□ 0.67
NDC1Q9BTX1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 AC008403.3-201ENST00000598924 454 ntBASIC19.22■□□□□ 0.67
NDC1Q9BTX1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.22■□□□□ 0.67
NDC1Q9BTX1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 AC008687.6-201ENST00000596318 630 ntBASIC19.21■□□□□ 0.67
NDC1Q9BTX1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.21■□□□□ 0.67
NDC1Q9BTX1 AC073648.6-201ENST00000641589 218 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms