Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 TSPY20P-201ENST00000450910 630 ntBASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCGF1Q9BSM1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 KRT18P68-201ENST00000392293 1000 ntBASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCGF1Q9BSM1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
PCGF1Q9BSM1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 CYP21A1P-202ENST00000354927 1481 ntBASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 ABHD17AP1-201ENST00000358206 933 ntBASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 AC083880.1-201ENST00000608266 535 ntBASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCGF1Q9BSM1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 FAM201B-201ENST00000458407 597 ntBASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 MIR4651-201ENST00000582622 73 ntBASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 AC121338.2-201ENST00000622535 1744 ntBASIC16.82■□□□□ 0.28
PCGF1Q9BSM1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF1Q9BSM1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF1Q9BSM1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF1Q9BSM1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.81■□□□□ 0.28
PCGF1Q9BSM1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF1Q9BSM1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF1Q9BSM1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PCGF1Q9BSM1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCGF1Q9BSM1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.81■□□□□ 0.28
PCGF1Q9BSM1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms