Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.54■□□□□ 0.72
TUBGCP3Q96CW5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TUBGCP3Q96CW5 RBM17P2-201ENST00000616397 1405 ntBASIC19.54■□□□□ 0.72
TUBGCP3Q96CW5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TUBGCP3Q96CW5 AC123595.1-201ENST00000440769 1046 ntBASIC19.54■□□□□ 0.72
TUBGCP3Q96CW5 AC243732.1-201ENST00000612648 864 ntBASIC19.54■□□□□ 0.72
TUBGCP3Q96CW5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBGCP3Q96CW5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBGCP3Q96CW5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TUBGCP3Q96CW5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.54■□□□□ 0.72
TUBGCP3Q96CW5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBGCP3Q96CW5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 AC125437.2-201ENST00000625180 2167 ntBASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBGCP3Q96CW5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 FAM21FP-204ENST00000608637 956 ntBASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.52■□□□□ 0.72
TUBGCP3Q96CW5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TUBGCP3Q96CW5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 AL158211.5-201ENST00000623583 2518 ntBASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.51■□□□□ 0.71
TUBGCP3Q96CW5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 YBX1P1-201ENST00000445822 960 ntBASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 AC004854.2-201ENST00000608450 1441 ntBASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBGCP3Q96CW5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBGCP3Q96CW5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms