Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 AC069152.1-201ENST00000438030 544 ntBASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 AC098934.4-201ENST00000564127 592 ntBASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 AC133041.1-202ENST00000642053 222 ntBASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 KRT8P17-201ENST00000453110 1448 ntBASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CTHRC1Q96CG8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 AC073130.3-201ENST00000624389 2278 ntBASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTHRC1Q96CG8 BX119927.1-201ENST00000636596 1552 ntBASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 AC097658.1-201ENST00000475555 843 ntBASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 AL031963.3-201ENST00000606441 850 ntBASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTHRC1Q96CG8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 KRT8P20-201ENST00000423953 1409 ntBASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.71■□□□□ 0.59
CTHRC1Q96CG8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.71■□□□□ 0.58
CTHRC1Q96CG8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.71■□□□□ 0.58
CTHRC1Q96CG8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTHRC1Q96CG8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.7■□□□□ 0.58
CTHRC1Q96CG8 AL391422.3-201ENST00000603791 2761 ntBASIC18.7■□□□□ 0.58
CTHRC1Q96CG8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTHRC1Q96CG8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.7■□□□□ 0.58
CTHRC1Q96CG8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTHRC1Q96CG8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTHRC1Q96CG8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms