Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 DPP3P2-201ENST00000416030 1696 ntBASIC18.59■□□□□ 0.57
CNOT9Q92600 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT9Q92600 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT9Q92600 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
CNOT9Q92600 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT9Q92600 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.58■□□□□ 0.57
CNOT9Q92600 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.58■□□□□ 0.57
CNOT9Q92600 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
CNOT9Q92600 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT9Q92600 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.58■□□□□ 0.57
CNOT9Q92600 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.58■□□□□ 0.56
CNOT9Q92600 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.58■□□□□ 0.56
CNOT9Q92600 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.58■□□□□ 0.56
CNOT9Q92600 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT9Q92600 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT9Q92600 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.58■□□□□ 0.56
CNOT9Q92600 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.58■□□□□ 0.56
CNOT9Q92600 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT9Q92600 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT9Q92600 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.58■□□□□ 0.56
CNOT9Q92600 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT9Q92600 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.58■□□□□ 0.56
CNOT9Q92600 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CNOT9Q92600 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT9Q92600 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT9Q92600 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.57■□□□□ 0.56
CNOT9Q92600 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT9Q92600 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
CNOT9Q92600 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CNOT9Q92600 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT9Q92600 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CNOT9Q92600 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT9Q92600 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.57■□□□□ 0.56
CNOT9Q92600 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT9Q92600 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CNOT9Q92600 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT9Q92600 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CNOT9Q92600 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT9Q92600 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT9Q92600 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT9Q92600 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CNOT9Q92600 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT9Q92600 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT9Q92600 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
CNOT9Q92600 MCRIP2P1-201ENST00000394346 511 ntBASIC18.56■□□□□ 0.56
CNOT9Q92600 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CNOT9Q92600 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.56■□□□□ 0.56
CNOT9Q92600 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.56■□□□□ 0.56
CNOT9Q92600 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.56■□□□□ 0.56
CNOT9Q92600 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CNOT9Q92600 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT9Q92600 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT9Q92600 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT9Q92600 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT9Q92600 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.56■□□□□ 0.56
CNOT9Q92600 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT9Q92600 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.56■□□□□ 0.56
CNOT9Q92600 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CNOT9Q92600 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CNOT9Q92600 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CNOT9Q92600 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT9Q92600 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT9Q92600 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT9Q92600 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.55■□□□□ 0.56
CNOT9Q92600 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT9Q92600 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT9Q92600 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.55■□□□□ 0.56
CNOT9Q92600 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT9Q92600 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT9Q92600 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.55■□□□□ 0.56
CNOT9Q92600 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CNOT9Q92600 AC069236.1-201ENST00000604339 616 ntBASIC18.55■□□□□ 0.56
CNOT9Q92600 AC080038.1-201ENST00000611274 1154 ntBASIC18.55■□□□□ 0.56
CNOT9Q92600 AC100791.3-201ENST00000617619 330 ntBASIC18.55■□□□□ 0.56
CNOT9Q92600 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT9Q92600 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT9Q92600 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CNOT9Q92600 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT9Q92600 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.55■□□□□ 0.56
CNOT9Q92600 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT9Q92600 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNOT9Q92600 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.55■□□□□ 0.56
CNOT9Q92600 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.55■□□□□ 0.56
CNOT9Q92600 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNOT9Q92600 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms