Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 AC098818.2-201ENST00000564925 2320 ntBASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC44A1Q8WWI5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 AC005332.7-201ENST00000614046 2005 ntBASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 MIR935-201ENST00000401179 91 ntBASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 AL020996.1-203ENST00000536896 2307 ntBASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC44A1Q8WWI5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC44A1Q8WWI5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 AC004854.2-201ENST00000608450 1441 ntBASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC44A1Q8WWI5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 CDV3P1-201ENST00000471403 739 ntBASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC44A1Q8WWI5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 AC093484.2-201ENST00000580996 2166 ntBASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms