Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM4Q8WVI0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 AC061975.6-201ENST00000579045 1553 ntBASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.23■□□□□ 0.35
SMIM4Q8WVI0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 AC005224.4-201ENST00000583262 1652 ntBASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMIM4Q8WVI0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 SERBP1P1-201ENST00000396021 1160 ntBASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 LINC01465-201ENST00000408887 1940 ntBASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMIM4Q8WVI0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.21■□□□□ 0.34
SMIM4Q8WVI0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SMIM4Q8WVI0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.21■□□□□ 0.34
SMIM4Q8WVI0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.21■□□□□ 0.34
SMIM4Q8WVI0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 DPP3P2-201ENST00000416030 1696 ntBASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 AC120498.9-201ENST00000339021 3867 ntBASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 AL356740.2-201ENST00000601559 647 ntBASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 AC011298.3-201ENST00000615796 283 ntBASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMIM4Q8WVI0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms