Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 MIR718-201ENST00000390190 70 ntBASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 AL023875.1-201ENST00000640777 796 ntBASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SH3RF2Q8TEC5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.96■□□□□ 0.95
SH3RF2Q8TEC5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SH3RF2Q8TEC5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 Z99916.2-201ENST00000604037 246 ntBASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SH3RF2Q8TEC5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 AC124016.1-201ENST00000609552 612 ntBASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3RF2Q8TEC5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 AC239809.2-201ENST00000415381 517 ntBASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3RF2Q8TEC5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms