Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SMARCC2Q8TAQ2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
SMARCC2Q8TAQ2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SMARCC2Q8TAQ2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
SMARCC2Q8TAQ2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMARCC2Q8TAQ2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMARCC2Q8TAQ2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SMARCC2Q8TAQ2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.64■■□□□ 1.37
SMARCC2Q8TAQ2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.64■■□□□ 1.37
SMARCC2Q8TAQ2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.64■■□□□ 1.37
SMARCC2Q8TAQ2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMARCC2Q8TAQ2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SMARCC2Q8TAQ2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 CYP21A1P-202ENST00000354927 1481 ntBASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 TCF3P1-201ENST00000423021 1937 ntBASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 AC087633.2-202ENST00000565166 1439 ntBASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 MIR4758-201ENST00000577688 71 ntBASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.63■■□□□ 1.37
SMARCC2Q8TAQ2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 AC069152.1-201ENST00000438030 544 ntBASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 AC133041.1-202ENST00000642053 222 ntBASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SMARCC2Q8TAQ2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 AC098934.4-201ENST00000564127 592 ntBASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SMARCC2Q8TAQ2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 AL356652.1-201ENST00000615962 565 ntBASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 AC100791.3-201ENST00000617619 330 ntBASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.6■■□□□ 1.37
SMARCC2Q8TAQ2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMARCC2Q8TAQ2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SMARCC2Q8TAQ2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SMARCC2Q8TAQ2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms