Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 SLC25A3P1-201ENST00000443844 931 ntBASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNIP1Q8TAD8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 AC010542.4-201ENST00000563151 1910 ntBASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 AC026471.6-201ENST00000622954 1905 ntBASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 FITM1-202ENST00000559294 800 ntBASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 AC087388.1-201ENST00000571370 1112 ntBASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNIP1Q8TAD8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNIP1Q8TAD8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 AP002982.1-201ENST00000492365 877 ntBASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 AC010947.1-201ENST00000623454 693 ntBASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNIP1Q8TAD8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 CYP2D8P-201ENST00000433633 1490 ntBASIC19.03■□□□□ 0.64
SNIP1Q8TAD8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNIP1Q8TAD8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms