Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 AL355802.2-201ENST00000402069 882 ntBASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 AL512625.2-201ENST00000417533 625 ntBASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 AC105020.6-201ENST00000621523 1217 ntBASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH19Q8TAB3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 AC133552.2-202ENST00000575694 574 ntBASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
PCDH19Q8TAB3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 TCF3P1-201ENST00000423021 1937 ntBASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH19Q8TAB3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PCDH19Q8TAB3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH19Q8TAB3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH19Q8TAB3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH19Q8TAB3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDH19Q8TAB3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH19Q8TAB3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH19Q8TAB3 GPX1P1-201ENST00000388829 606 ntBASIC20.83■□□□□ 0.93
PCDH19Q8TAB3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH19Q8TAB3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.83■□□□□ 0.93
PCDH19Q8TAB3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDH19Q8TAB3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.83■□□□□ 0.93
PCDH19Q8TAB3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDH19Q8TAB3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PCDH19Q8TAB3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH19Q8TAB3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
PCDH19Q8TAB3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH19Q8TAB3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH19Q8TAB3 KRT17P1-201ENST00000399211 1546 ntBASIC20.83■□□□□ 0.92
PCDH19Q8TAB3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH19Q8TAB3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH19Q8TAB3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 PTBP1P-201ENST00000554374 1601 ntBASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH19Q8TAB3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 AFG3L1P-217ENST00000557444 2447 ntBASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH19Q8TAB3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms