Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LINS1Q8NG48 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
LINS1Q8NG48 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LINS1Q8NG48 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
LINS1Q8NG48 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
LINS1Q8NG48 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LINS1Q8NG48 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
LINS1Q8NG48 AL158047.1-201ENST00000445918 881 ntBASIC25.33■■□□□ 1.65
LINS1Q8NG48 THEM4-205ENST00000489410 643 ntTSL 2 BASIC25.33■■□□□ 1.65
LINS1Q8NG48 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
LINS1Q8NG48 MTDHP1-201ENST00000605323 784 ntBASIC25.33■■□□□ 1.65
LINS1Q8NG48 AL031963.3-201ENST00000606441 850 ntBASIC25.33■■□□□ 1.65
LINS1Q8NG48 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC25.33■■□□□ 1.65
LINS1Q8NG48 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
LINS1Q8NG48 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.33■■□□□ 1.65
LINS1Q8NG48 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC25.33■■□□□ 1.65
LINS1Q8NG48 AC092720.2-201ENST00000602388 1665 ntBASIC25.32■■□□□ 1.64
LINS1Q8NG48 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LINS1Q8NG48 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
LINS1Q8NG48 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LINS1Q8NG48 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
LINS1Q8NG48 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC25.32■■□□□ 1.64
LINS1Q8NG48 RPPH1-201ENST00000516869 333 ntBASIC25.32■■□□□ 1.64
LINS1Q8NG48 RNF121-214ENST00000533380 870 ntTSL 3 BASIC25.32■■□□□ 1.64
LINS1Q8NG48 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.32■■□□□ 1.64
LINS1Q8NG48 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.32■■□□□ 1.64
LINS1Q8NG48 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.32■■□□□ 1.64
LINS1Q8NG48 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LINS1Q8NG48 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC25.32■■□□□ 1.64
LINS1Q8NG48 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
LINS1Q8NG48 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.32■■□□□ 1.64
LINS1Q8NG48 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
LINS1Q8NG48 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
LINS1Q8NG48 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.31■■□□□ 1.64
LINS1Q8NG48 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINS1Q8NG48 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LINS1Q8NG48 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.31■■□□□ 1.64
LINS1Q8NG48 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LINS1Q8NG48 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
LINS1Q8NG48 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.31■■□□□ 1.64
LINS1Q8NG48 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC25.31■■□□□ 1.64
LINS1Q8NG48 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC25.31■■□□□ 1.64
LINS1Q8NG48 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC25.31■■□□□ 1.64
LINS1Q8NG48 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.31■■□□□ 1.64
LINS1Q8NG48 DPP3P2-201ENST00000416030 1696 ntBASIC25.31■■□□□ 1.64
LINS1Q8NG48 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINS1Q8NG48 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.31■■□□□ 1.64
LINS1Q8NG48 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LINS1Q8NG48 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LINS1Q8NG48 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LINS1Q8NG48 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LINS1Q8NG48 HLA-G-202ENST00000376815 851 ntBASIC25.3■■□□□ 1.64
LINS1Q8NG48 HLA-G-203ENST00000376818 1127 ntBASIC25.3■■□□□ 1.64
LINS1Q8NG48 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.3■■□□□ 1.64
LINS1Q8NG48 C1QBPP2-201ENST00000528754 825 ntBASIC25.3■■□□□ 1.64
LINS1Q8NG48 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.3■■□□□ 1.64
LINS1Q8NG48 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.3■■□□□ 1.64
LINS1Q8NG48 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LINS1Q8NG48 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LINS1Q8NG48 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LINS1Q8NG48 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
LINS1Q8NG48 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
LINS1Q8NG48 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
LINS1Q8NG48 KRT8P20-201ENST00000423953 1409 ntBASIC25.29■■□□□ 1.64
LINS1Q8NG48 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC25.29■■□□□ 1.64
LINS1Q8NG48 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.29■■□□□ 1.64
LINS1Q8NG48 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC25.29■■□□□ 1.64
LINS1Q8NG48 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LINS1Q8NG48 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LINS1Q8NG48 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LINS1Q8NG48 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.29■■□□□ 1.64
LINS1Q8NG48 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.29■■□□□ 1.64
LINS1Q8NG48 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.29■■□□□ 1.64
LINS1Q8NG48 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.29■■□□□ 1.64
LINS1Q8NG48 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LINS1Q8NG48 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.29■■□□□ 1.64
LINS1Q8NG48 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
LINS1Q8NG48 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC25.29■■□□□ 1.64
LINS1Q8NG48 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LINS1Q8NG48 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
LINS1Q8NG48 KRT8P17-201ENST00000453110 1448 ntBASIC25.29■■□□□ 1.64
LINS1Q8NG48 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LINS1Q8NG48 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LINS1Q8NG48 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.28■■□□□ 1.64
LINS1Q8NG48 DET1-205ENST00000558413 583 ntTSL 4 BASIC25.28■■□□□ 1.64
LINS1Q8NG48 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC25.28■■□□□ 1.64
LINS1Q8NG48 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
LINS1Q8NG48 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
LINS1Q8NG48 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LINS1Q8NG48 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.28■■□□□ 1.64
LINS1Q8NG48 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LINS1Q8NG48 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LINS1Q8NG48 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LINS1Q8NG48 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
LINS1Q8NG48 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LINS1Q8NG48 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC25.27■■□□□ 1.64
LINS1Q8NG48 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
LINS1Q8NG48 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LINS1Q8NG48 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LINS1Q8NG48 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms