Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
PNMA1Q8ND90 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 PKD1P6-201ENST00000343738 4769 ntBASIC23.49■■□□□ 1.35
PNMA1Q8ND90 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PNMA1Q8ND90 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 AC073314.1-201ENST00000568729 2216 ntBASIC23.48■■□□□ 1.35
PNMA1Q8ND90 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 RER1-204ENST00000378518 522 ntTSL 3 BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 AC008687.6-201ENST00000596318 630 ntBASIC23.48■■□□□ 1.35
PNMA1Q8ND90 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.48■■□□□ 1.35
PNMA1Q8ND90 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 TMEM191A-211ENST00000637163 1067 ntBASIC23.47■■□□□ 1.35
PNMA1Q8ND90 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PNMA1Q8ND90 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 KRT18P29-201ENST00000397031 1267 ntBASIC23.46■■□□□ 1.35
PNMA1Q8ND90 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 AC128676.1-201ENST00000454392 318 ntBASIC23.46■■□□□ 1.35
PNMA1Q8ND90 HES2-206ENST00000489730 730 ntTSL 2 BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PNMA1Q8ND90 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PNMA1Q8ND90 AC020907.5-201ENST00000624372 1936 ntBASIC23.45■■□□□ 1.35
PNMA1Q8ND90 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 AC073648.6-201ENST00000641589 218 ntBASIC23.45■■□□□ 1.34
PNMA1Q8ND90 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PNMA1Q8ND90 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms