Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 TSPY20P-201ENST00000450910 630 ntBASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
PCDH20Q8N6Y1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH20Q8N6Y1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH20Q8N6Y1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH20Q8N6Y1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH20Q8N6Y1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH20Q8N6Y1 AC006128.1-201ENST00000624704 1661 ntBASIC20.58■□□□□ 0.89
PCDH20Q8N6Y1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH20Q8N6Y1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH20Q8N6Y1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDH20Q8N6Y1 UNC93B5-201ENST00000530315 699 ntBASIC20.58■□□□□ 0.89
PCDH20Q8N6Y1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PCDH20Q8N6Y1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDH20Q8N6Y1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDH20Q8N6Y1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH20Q8N6Y1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH20Q8N6Y1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH20Q8N6Y1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 AC092368.3-202ENST00000574180 1591 ntBASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 POU5F1P3-201ENST00000428824 1078 ntBASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 FAM201B-201ENST00000458407 597 ntBASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 PNMA6B-201ENST00000538162 1200 ntBASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH20Q8N6Y1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 LINC01521-201ENST00000504184 1943 ntBASIC20.55■□□□□ 0.88
PCDH20Q8N6Y1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH20Q8N6Y1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms