Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 CDV3P1-201ENST00000471403 739 ntBASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 AC026366.1-201ENST00000488803 879 ntBASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC33Q8N5R6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 CYP2T3P-201ENST00000601990 817 ntBASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 FAM21FP-204ENST00000608637 956 ntBASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 AP006294.2-201ENST00000641667 209 ntBASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC33Q8N5R6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 AP003097.1-201ENST00000530657 1135 ntBASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC33Q8N5R6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 AC073648.6-201ENST00000641589 218 ntBASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC33Q8N5R6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms