Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM20Q8N5G0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM20Q8N5G0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM20Q8N5G0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC12.61□□□□□ -0.39
SMIM20Q8N5G0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM20Q8N5G0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM20Q8N5G0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM20Q8N5G0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
SMIM20Q8N5G0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM20Q8N5G0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM20Q8N5G0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 AL512408.1-201ENST00000569378 2000 ntBASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM20Q8N5G0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
SMIM20Q8N5G0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
SMIM20Q8N5G0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SMIM20Q8N5G0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SMIM20Q8N5G0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 TSPY26P-202ENST00000565928 3884 ntBASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SMIM20Q8N5G0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms